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Combined display of all available logs of SICDB Doc. You can narrow down the view by selecting a log type, the username (case-sensitive), or the affected page (also case-sensitive).

Logs
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  • 07:14, 7 October 2022 Salkin talk contribs created page Navigate to data folder (Created page with "To navigate in commandline (windows) you need the following commands: '''cd''' and the change drive command. If you have your data in D:/Data so the following: - Execute "D:" (will change to correct drive) - Execute "cd Data" (will change to correct folder)")
  • 07:10, 7 October 2022 Salkin talk contribs created page Open commandline (Created page with "To open the commandline on a windows machine click onto the Windows symbol (or press Windows key) and enter "cmd". You may need to start as administrator (right click, Run as Administrator).")
  • 06:45, 7 October 2022 Salkin talk contribs moved page QuickStart to Get Started
  • 06:45, 7 October 2022 Salkin talk contribs deleted page Get Started (content was: "== Simple Quick Start == There is an uncountable amount of ways to use medical datasets. Everyone, who has worked with raw .csv data knows, that it can take weeks to analyze, convert, filter and export data to use in statistical software. The SICDb Team therefore provides a fully configured environment, including a set of examples to get started as quick as possible. == System...", and the only contributor was "Salkin" (talk))
  • 06:41, 7 October 2022 Salkin talk contribs created page MediaWiki:Sidebar (Created page with " * navigation ** mainpage|mainpage-description ** recentchanges-url|recentchanges ** helppage|help-mediawiki * SEARCH * TOOLBOX * LANGUAGES")
  • 15:36, 18 September 2022 Salkin talk contribs created page Data Description (Created page with "The SICdb dataset consists of X tables. The main tables are cases, d_references,")
  • 22:11, 17 September 2022 Salkin talk contribs created page Template:Beta Version (Created page with "SICdb dataset, the documentation and SICdb Environment are, as of 09/22, in active development. We try to improve our project as fast as we can! We'd love to find some motivated researchers attain as much as possible from our dataset. Contact us on [https://discord.gg/pUTMPN9X Discord]")
  • 19:19, 17 September 2022 Salkin talk contribs created page SICdb Environment (Created page with "== Introduction == Working with medium sized datasets like SICdb may present a challenge to work with. While it is still possible to access using standard consumer hardware, not all applications are able to load, view, and filter data this size. At more than a billion data entries not even Spreadsheet software like Microsoft Excel will crumble, even importing into a mysql database may cause problems. As we faced the issue that even mysqldump/msyqlimport on a 40gb machin...")
  • 16:09, 17 September 2022 Salkin talk contribs created page QuickStart (Created page with "== Introduction == The SICdb dataset is provided in compressed .csv files, the minute values are even more consolidated. Refer to the Main Page for detailed description of files. The SICdb dataset contains billions of entries, therefore building up a database may present a challenge. Therefore a 'as simple as possible' solution is provided. Refer to the Quick Start chapter if you know how the commandline and docker is working, skip to the Detailed Instructions fo...")
  • 10:43, 11 September 2022 Salkin talk contribs created page Table: Cases (Redirected page to Case Data) Tag: New redirect
  • 10:37, 11 September 2022 Salkin talk contribs created page Signal Data (Created page with "== Data Description == Various types of signal data has been included in the SICDb dataset. Signal data is saved in == Aggregation Description == Most signal data is averaged. The field data_float_h.cnt describes the amount of values aggregated. It is to be expected that the first signal values have less than 60 data points, as it is quite unlikely (1:60) that signal starts on minute 0. Raw values are saved in field data_float_h.rawdata, being a list of bytes. (IEEE...")
  • 13:08, 10 September 2022 Salkin talk contribs created page Generated Field (Created page with "In development of SICDb several fields have been computed using machine learning methods, rules and manual edits. In many cases this had been necessary due to anonymization. If not noted otherwise, it is expected that all published generated fields have more than 95% validity. As for the whole dataset no warranty for correctnes can be provided.")
  • 07:36, 8 September 2022 Salkin talk contribs created page Reference Table (Created page with "==Table Description== The d_references table contains information on all encoded data fields of the SICDB dataset. To simplify JOIN and other types of subqueries each reference value has an unique global identifier. To reduce the amount of tables there is no table describing references published as there is no significant gain of information expected. This may change in later versions of dataset. To enumerate a reference use table d_references.ReferenceName, which is a...")
  • 14:32, 19 February 2022 Salkin talk contribs created page MediaWiki:Common.js (Created page with "Any JavaScript here will be loaded for all users on every page load.: var _paq = window._paq = window._paq || []; tracker methods like "setCustomDimension" should be called before "trackPageView": _paq.push(['trackPageView']); _paq.push(['enableLinkTracking']); (function() { var u="//rodemund.net/sicdb/matomo/"; _paq.push(['setTrackerUrl', u+'matomo.php']); _paq.push(['setSiteId', '2']); var d=document, g=d.createElement('script'), s...")
  • 10:44, 16 February 2022 Salkin talk contribs created page Version (Created page with "== General Information == The SICDB dataset uses a versioning system. It contains 3 numbers major, minor and patch. A suffix may be added for changes, the do not necessarily needs to be applied. A major version change generally occurs when the database was incrementally updated and more cases are included. A minor version change occurs when data was altered that will likely change most study data. (i.e. removal of a significant amount of invalid cases) A minor update...")
  • 10:33, 16 February 2022 Salkin talk contribs created page Case Description (Created page with "== Case Selection == With Version 1.0.0 all admissions to participating intensiv care units are included, as long as following conditions do not apply: * Less the 10 Minutes of Stay * Missing mandatory admission data * No monitor signals * No medication data * hospital number mismatch == Unit Description == The participating metavision enabled wards are CWIN, INBD, INIC, and INIC. INCV and CWCV are used for cases associated with SARS-COV-2, this includes...")
  • 14:26, 6 February 2022 Salkin talk contribs created page Extension Troubleshooting and Tipps (Created page with "== How to include nuget packages to Extension? == You may include nuget packages to your extension. The easiest way is adding following to your .csproj: ::<PropertyGroup><CopyLocalLockFileAssemblies>true</CopyLocalLockFileAssemblies></PropertyGroup>")
  • 13:29, 1 February 2022 Salkin talk contribs created page Case Data (Created page with "== Data Description == The cases table contains unique intensive care admissions and case related data. The case starts with startin a new Metavision case, which may be created for the anaesthesia preceding the intensive care stay. == Predefined Fields (RoDataServer) == == Known Limitations == The cases data is generally considered as being widely valid. Nevertheless there are some limitations to be stated. === Time of stay === In most cases at a readmission in sam...")
  • 11:13, 1 February 2022 Salkin talk contribs created page Extend RoDataServer (Created page with "Extending RoDataServer needs significant programming skills. RoDataServer can be extended by creating a [https://en.wikipedia.org/wiki/.NET .NET] library. == Modules == RoDataServer provides several possibilites to extend its functionalities. To ensure high extendability most default modules are loaded as extensions and are open source. Most modules can be loaded and configured in default RoDataServer User Interface. === Export Module === Export modules can use full...")
  • 10:58, 1 February 2022 Salkin talk contribs created page RoDataServer (Created page with "RoDataServer is a software to browse and export ICU Data developed for the SICDB project. It provides a potent query manager to select, preview and export queries. Hundreds of predefined and parameterizable subquery fields are added for convenience and to serve as examples. Several quick statistic and charts modules are included to predict study outcome. RoDataServer is highly extensible, learn here how to Extend RoDataServer.")
  • 10:49, 1 February 2022 Salkin talk contribs created page Get Started (Created page with "== Environment Description == The Database environmen contains several modules * MySQL 8.x Server * RoDataServer * (optional) Apache, PHP, phpMyAdmin == Install == As the database is of significant size and tables are indexed and optimized it may be difficult to restore database from a dumpfile.")
  • 10:18, 1 February 2022 Salkin talk contribs created page Medication Data (Created page with "== Data Description == The medication table contains data == Predefined Fields (RoDataServer) == == Known Limitations == The medication data is generally considered as being widely valid. Nevertheless there are some limitations to be stated: === Offsets and Times === The offset is the documented time of drug application. As the observed intensive care unity do not use perfusor telemetry all values are entered manually. Following inaccuracies of of time give may be...")
  • 10:09, 1 February 2022 Salkin talk contribs created page Main Page (Created page with "== Welcome to SICDB Documentation == The SICDB Dataset contains intensive care data form over 25.000 admissions from 2013-2021, admitted to University Hospital Salzburg. === The Dataset === The Dataset contains amongst others following data: * Case Data (Time of stay, ICD10, ...) * Monitor Signal Data * Respiratory Care Data * Laboratory Data * Medication Data * Event data All nominal fields are referenced in table d_references. === The Database ==...")
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