Difference between revisions of "Signal Data"

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Various types of signal data has been included in the SICDb dataset. Signal data is saved in [[data_float_h]] table, value reference is found in d_references.
Various types of signal data has been included in the SICDb dataset. Signal data is saved in [[data_float_h]] table, value reference is found in d_references.


== Predefined Fields (RooDataServer) ==
Important note: Data stored in [[data_float_h]] is aggregated hourly data.
 
== Predefined Fields ([[RooDataServer]]) ==


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== Aggregation Description ==
{{:Float Data Hourly}}
Most signal data is averaged. The field data_float_h.cnt describes the amount of values aggregated. It is to be expected that the first signal values have less than 60 data points, as it is quite unlikely (1:60) that signal starts on minute 0.
 
Raw values are saved in field data_float_h.rawdata, being a list of bytes. (IEEE 754 Single(4 bytes), LittleEndian)
 
Metavision does, in database, not differentiate between qualitative (i.e. blood pressure) and quantitative (i.e. drainage volume) data, this was done programatically saving the sum instead of average.
 
== Known Limitations ==
=== 0 Values ===
All values were aggregated to hourly average values. As in many cases Metavision saves 0 values during signal loss times instead of NULL aggregating these would significantly influence statistics. Think about a patient with constant MAP of 60 is disconnected for 15min, aggregating would result in a average MAP of 45. For this reason 0 values were set to NULL and ignored. This behaviour is expected to represent in nearly all cases the most likely value.
 
In very special cases, like cardioplegia, where 0 would be a correct pulse rate, expect values to be missing. Contact developer in case you need this data.

Latest revision as of 14:51, 10 October 2022

Data Description

Various types of signal data has been included in the SICDb dataset. Signal data is saved in data_float_h table, value reference is found in d_references.

Important note: Data stored in data_float_h is aggregated hourly data.

Predefined Fields (RooDataServer)

Generic Signal
Name Description Comment Type
SignalCountHours Amount of hours where selected signal data is available O D
SignalAvg Average signal value of selected signal O D
SignalMin Minimum hourly average signal value of selected signal O D
SignalMax Maximum hourly average signal value of selected signal O D
SignalHoursUnderX Amount of hours, where the average signal value is under X O D
SignalHoursOverX Amount of hours, where the average signal value is >= X O D
SignalHoursBetweenXY Amount of hours, where the average signal value is >=Min and <Max O D
SignalStd Standard deviation of average hourly values of selected signal O D


Contains hourly float data associated with a case. If more (minute) data is available, data was aggregated and the corresponding values are stored in rawdata field. Refer to Deserialize Raw Data for more information. Metavision does, in database, not differentiate between qualitative (i.e. blood pressure) and quantitative (i.e. drainage volume) data, this was done programatically saving the sum instead of average. The field cnt indicates the amount of values aggregated.

data_float_h.csv.gz
Name Type Description Comment
CaseID Integer Case identifier
DataID Reference
Offset Integer Time in seconds after admission
Val Float Value The unit (if applicable) is found in d_references where data_float_h.DataID is associated to d_references.ReferenceGlobalID
cnt Integer Amount of values aggregated
rawdata Blob List of 60 floats containing raw data Due to excessive storage needs minute values have been aggregated.
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